recipe homopolish

Homopolish is a polish tools

Homepage:

https://github.com/ythuang0522/homopolish

License:

GNU GENERAL PUBLIC LICENSE

Recipe:

/homopolish/meta.yaml

package homopolish

Versions:

0.4.1-1,  0.4.1-0,  0.3.3-0,  0.2.1-0,  0.0.2-0,  0.0.1-0

Depends:

• _libgcc_mutex >=0.1

• _openmp_mutex >=4.5

• arrow-cpp >=0.15.1

• biopython >=1.76

• blas >=2.17

• boost >=1.70.0,<1.70.1.0a0

• boost-cpp >=1.70.0

• brotli >=1.0.9

• brotlipy >=0.7.0

• bzip2 >=1.0.8,<2.0a0

• c-ares >=1.16.1

• ca-certificates >=2022.07.19

• capnproto >=0.6.1

• certifi >=2022.6.15

• cffi >=1.14.3

• chardet >=3.0.4

• colorama >=0.4.4

• cryptography >=3.1.1

• curl >=7.78.0

• double-conversion >=3.1.5

• fastani 1.32.*

• feather-format >=0.4.1

• gflags >=2.2.2

• glog >=0.4.0

• grpc-cpp >=1.25.0

• gsl 2.4.*

• icu >=58.2

• idna >=2.10

• joblib >=0.15.1

• k8 >=0.2.5

• krb5 >=1.19.2

• ld_impl_linux-64 >=2.33.1

• libblas >=3.8.0

• libcblas >=3.8.0

• libcurl >=7.78.0

• libdeflate >=1.0

• libedit >=3.1.20210910

• libev >=4.33

• libffi >=3.4.2,<3.5.0a0

• libgcc-ng >=12.1.0

• libgfortran-ng >=7.3.0

• liblapack >=3.8.0

• liblapacke >=3.8.0

• libnghttp2 >=1.41.0

• libopenblas >=0.3.10

• libprotobuf >=3.10.1

• libssh2 >=1.9.0

• libstdcxx-ng >=12.1.0

• llvm-openmp >=12.0.1

• lz4-c >=1.8.3

• mash 2.1.1.*

• minimap2 >=2.17

• more-itertools >=8.4.0

• ncbi-datasets-cli >=13.37.2

• ncurses >=6.3

• numpy 1.18.5.*

• numpy-base 1.18.5.*

• openssl >=1.1.0,<=1.1.1

• pandas >=0.23.4

• parquet-cpp >=1.5.1

• pyarrow >=0.15.1

• pycparser >=2.20

• pycurl >=7.43.0.6

• pyopenssl >=19.1.0

• pysam >=0.15.3

• pysocks >=1.7.1

• python

• python-dateutil >=2.8.1

• python-wget >=3.2

• pytz >=2020.1

• re2 >=2019.08.01

• readline >=8.1.2,<9.0a0

• requests >=2.24.0

• scikit-learn 0.21.3.*

• scipy >=1.5.2

• setuptools >=50.3.0

• six >=1.15.0

• snappy >=1.1.8

• sqlite >=3.33.0

• thrift-cpp >=0.12.0

• tk >=8.6.12,<8.7.0a0

• tqdm >=4.63.0

• uriparser >=0.9.3

• urllib3 >=1.25.11

• wheel >=0.35.1

• xz >=5.2.6,<5.3.0a0

• zlib >=1.2.11,<1.3.0a0

• zstd >=1.4.4

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install homopolish

and update with:

conda update homopolish

or use the docker container:

docker pull quay.io/biocontainers/homopolish:<tag>

(see homopolish/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/homopolish/README.html)