- recipe hopla
Hopla enables classic genomic single, duo, trio, etc., analysis, by studying a single (multisample) vcf-file
- Homepage:
- License:
MIT
- Recipe:
- package hopla¶
-
- Versions:
1.2.0-0
,1.0.6-0
,1.0.5-0
,1.0.4-0
,1.0.3-0
,1.0.0-0
,0.3.4-0
,0.3.3-0
,0.3.1-0
,1.2.0-0
,1.0.6-0
,1.0.5-0
,1.0.4-0
,1.0.3-0
,1.0.0-0
,0.3.4-0
,0.3.3-0
,0.3.1-0
,0.2.2-0
,0.2.1-0
,0.1.4-0
,0.1.3-0
,0.1.2-1
,0.1.2-0
,0.1.1-1
,0.1.1-0
,0.1.0-0
- Depends:
bioconductor-dnacopy
>=1.64.0
bioconductor-genomicranges
>=1.42.0
merlin
1.1.2.*
pandoc
>=2.*
r-data.table
>=1.13.2
r-htmltools
>=0.5.0
r-kinship2
>=1.8.5
r-knitr
>=1.29
r-plotly
>=4.9.2.1
r-rcolorbrewer
>=1.1_2
r-vcfr
>=1.8.0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install hopla
and update with:
conda update hopla
or use the docker container:
docker pull quay.io/biocontainers/hopla:<tag>
(see hopla/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/hopla/README.html)