recipe hpsuissero

Rapid Haemophilus parasuis serotyping pipeline for Nanopore Data

Homepage

https://github.com/jimmyliu1326/HpsuisSero

License

MIT

Recipe

/hpsuissero/meta.yaml

package hpsuissero

Versions

1.0.0-1,  1.0.0-0

Depends

• blast >=2.6

• flye >=2.7.1

• medaka 1.0.1

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install hpsuissero

and update with:

conda update hpsuissero

or use the docker container:

docker pull quay.io/biocontainers/hpsuissero:<tag>

(see hpsuissero/tags for valid values for <tag>)

Download stats

Link to this page

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