recipe hyphy

An open-source software package for comparative sequence analysis using stochastic evolutionary models.

Homepage

http://hyphy.org/

Developer docs

https://github.com/veg/hyphy

License

MIT / MIT

Recipe

/hyphy/meta.yaml

HyPhy (Hypothesis Testing using Phylogenies) is an open-source software package for the analysis of genetic sequences (in particular the inference of natural selection) using techniques in phylogenetics, molecular evolution, and machine learning.

package hyphy

(downloads) docker_hyphy

Versions
2.5.17-02.5.16-02.5.15-02.5.14-02.5.12-12.5.12-02.5.11-02.5.10-02.5.9-0

2.5.17-02.5.16-02.5.15-02.5.14-02.5.12-12.5.12-02.5.11-02.5.10-02.5.9-02.5.8-12.5.8-02.5.7-02.5.6-02.5.5-02.5.4-12.5.4-02.5.3-02.5.2-12.5.2-02.5.1-12.5.1-02.5.0-12.5.0-02.3.14-12.3.14-02.3.12-12.3.12-02.3.11-22.3.11-12.3.11-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install hyphy

and update with:

conda update hyphy

or use the docker container:

docker pull quay.io/biocontainers/hyphy:<tag>

(see hyphy/tags for valid values for <tag>)