- recipe igda-script
The wrapper script of iGDA to detect and phase minor SNVs from long-read sequencing data
- package igda-script¶
While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.
Given that you already have a conda environment in which you want to have this package, install with:
mamba install igda-script and update with:: mamba update igda-script
To create a new environment, run:
mamba create --name myenvname igda-script
myenvnamebeing a reasonable name for the environment (see e.g. the mamba docs for details and further options).
Alternatively, use the docker container:
docker pull quay.io/biocontainers/igda-script:<tag> (see `igda-script/tags`_ for valid values for ``<tag>``)