recipe intarna

Efficient RNA-RNA interaction prediction incorporating seeding and accessibility of interacting sites

Homepage

https://github.com/BackofenLab/IntaRNA

License

MIT

Recipe

/intarna/meta.yaml

Links

biotools: intarna, doi: 10.1093/nar/gkx279, doi: 10.1093/bioinformatics/btn544, doi: 10.1093/nar/gky329

package intarna

Versions

3.2.0-0,  3.1.5-0,  3.1.3-0,  3.1.2-0,  3.1.1-0,  3.1.0.2-1,  3.1.0.2-0,  3.0.0-0,  2.4.1-0, 

3.2.0-0,  3.1.5-0,  3.1.3-0,  3.1.2-0,  3.1.1-0,  3.1.0.2-1,  3.1.0.2-0,  3.0.0-0,  2.4.1-0,  2.3.1-2,  2.3.1-1,  2.3.1-0,  2.3.0-0,  2.2.1-0,  2.2.0-3,  2.2.0-2,  2.2.0-1,  2.1.0-2,  2.1.0-1,  2.1.0-0,  2.0.5-0,  2.0.4-1,  2.0.3-1,  2.0.3-0,  2.0.2-0,  2.0.1-1,  2.0.1-0,  2.0.0-0,  1.2.5-2,  1.2.5-1

Depends

• boost-cpp >=1.70.0,<1.70.1.0a0

• libgcc-ng >=7.3.0

• libstdcxx-ng >=7.3.0

• viennarna >=2.4.14,<2.5.0a0

• zlib >=1.2.11,<1.3.0a0

Required By

• coprarna

• chira

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install intarna

and update with:

conda update intarna

or use the docker container:

docker pull quay.io/biocontainers/intarna:<tag>

(see intarna/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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