recipe iptkl

IPTK is a library specialized in the analysis of HLA-peptidomes identified through an immunopeptidomics pipeline.

Homepage:

https://github.com/ikmb/iptoolkit

Documentation:

https://iptk.readthedocs.io/en/latest/

License:

MIT / MIT

Recipe:

/iptkl/meta.yaml

package iptkl

Versions:

0.6.8-0,  0.6.5-0,  0.6.4-0

Depends:

• biopython

• bokeh

• colour

• dash

• goatools

• h5py

• holoviews

• logomaker

• lxml

• matplotlib-base

• mhcnames

• nglview

• numba

• pandas

• plotly

• pyopenms

• pyteomics

• python

• scikit-learn

• scipy

• seaborn

• tqdm

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install iptkl

and update with:

conda update iptkl

or use the docker container:

docker pull quay.io/biocontainers/iptkl:<tag>

(see iptkl/tags for valid values for <tag>)

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Link to this page

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