recipe iqkm

Identification and quantification of KEGG Modules in metagenomes/genomes

Homepage

https://github.com/lijingdi/iqKM

License

GPL3 / GPL-3.0-only

Recipe

/iqkm/meta.yaml

package iqkm

Versions

1.0-0

Depends

• bwa >=0.7.17

• hmmer >=3.1

• markdown

• networkx

• prodigal >=2.6.3

• pylint

• pysam

• pytest

• python >=3.8

• samtools >=1.3.1

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install iqkm

and update with:

conda update iqkm

or use the docker container:

docker pull quay.io/biocontainers/iqkm:<tag>

(see iqkm/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/iqkm/README.html)