recipe iqtree

Efficient phylogenomic software by maximum likelihood.

Homepage

http://www.iqtree.org/

Developer docs

https://github.com/iqtree/iqtree2

License

GPL-2.0-or-later

Recipe

/iqtree/meta.yaml

Links

biotools: iq-tree, doi: 10.1093/molbev/msu300, usegalaxy-eu: iqtree

package iqtree

Versions

2.2.0_beta-0,  2.1.4_beta-0,  2.1.2-0,  2.0.3-1,  2.0.3-0,  1.6.12-1,  1.6.12-0,  1.6.11.1-0,  1.6.11-0, 

2.2.0_beta-0,  2.1.4_beta-0,  2.1.2-0,  2.0.3-1,  2.0.3-0,  1.6.12-1,  1.6.12-0,  1.6.11.1-0,  1.6.11-0,  1.6.10-0,  1.6.9-1,  1.6.9-0,  1.6.8-0,  1.6.7.2-0,  1.6.7.1-0,  1.6.7-1,  1.6.7-0,  1.6.6-0,  1.5.5-2,  1.5.5-1,  1.5.5-0,  1.5.3-2,  1.5.3-1,  1.5.3-0

Depends

• libgcc-ng >=9.4.0

• libstdcxx-ng >=9.4.0

• libzlib >=1.2.11,<1.3.0a0

Required By

• wgdi

• augur

• gubbins

• bohra

• panacota

• funannotate

• nullarbor

• anvio

• orthofinder

• lotus2

• phylophlan

• phame

• pipelign

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install iqtree

and update with:

conda update iqtree

or use the docker container:

docker pull quay.io/biocontainers/iqtree:<tag>

(see iqtree/tags for valid values for <tag>)

Download stats

Link to this page

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