recipe jalview

Jalview is a free program for multiple sequence alignment editing, visualisation and analysis. Use it to view and edit sequence alignments, analyse them with phylogenetic trees and principal components analysis (PCA) plots and explore molecular structures and annotation.

Homepage

http://www.jalview.org/

License

GNU GENERAL PUBLIC LICENSE, Version 3.0

Recipe

/jalview/meta.yaml

package jalview

(downloads) docker_jalview

Versions

2.10.5-3, 2.10.4-0, 2.10.4b1-2, 2.10.4b1-0, 2.10.3-1, 2.10.3-0, 2.10.3b1-0, 2.10.2b2-2, 2.10.2b2-1, 2.10.2b2-0

Depends openjdk

>8.0.121

Depends psutil

Depends xorg-libxtst

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install jalview

and update with:

conda update jalview

or use the docker container:

docker pull quay.io/biocontainers/jalview:<tag>

(see jalview/tags for valid values for <tag>)

Notes

This wrapper and installation is primarily for commandline-only use.