recipe kaiju

Fast and sensitive taxonomic classification for metagenomics

Homepage:

http://kaiju.binf.ku.dk/

License:

GNU GPL v3

Recipe:

/kaiju/meta.yaml

Links:

biotools: kaiju, doi: 10.1038/ncomms11257

package kaiju

Versions:

1.9.2-2,  1.9.2-1,  1.9.2-0,  1.9.0-1,  1.9.0-0,  1.8.2-1,  1.8.2-0,  1.8.1-1,  1.8.1-0, 

1.9.2-2,  1.9.2-1,  1.9.2-0,  1.9.0-1,  1.9.0-0,  1.8.2-1,  1.8.2-0,  1.8.1-1,  1.8.1-0,  1.8.0-0,  1.7.4-1,  1.7.4-0,  1.7.3-1,  1.7.3-0,  1.7.2-0,  1.7.1-0,  1.7.0-2,  1.6.3-2,  1.6.3-1,  1.6.3-0,  1.6.2-1,  1.6.2-0,  1.6.1-1,  1.6.1-0,  1.5.0-0,  1.4.5-0,  1.4.4-3,  1.4.4-2,  1.4.4-1,  1.4.4-0,  1.0-0

Depends:

• libgcc-ng >=12

• libstdcxx-ng >=12

• libzlib >=1.2.13,<1.3.0a0

• perl

• python

• wget

• zlib

Required By:

• drax

• datma

• kodoja

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install kaiju

and update with:

conda update kaiju

or use the docker container:

docker pull quay.io/biocontainers/kaiju:<tag>

(see kaiju/tags for valid values for <tag>)

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