kallisto

downloads

Quantifying abundances of transcripts from RNA-Seq data, or more generally of target sequences using high-throughput sequencing reads.

Home http://pachterlab.github.io/kallisto
Versions 0.42.3, 0.42.4, 0.43.0
License Custom
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/kallisto

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install kallisto

and update with:

conda update kallisto

docker

A Docker container is available at https://quay.io/repository/biocontainers/kallisto.