kat

downloads

KAT is a suite of tools that analyse jellyfish hashes or sequence files (fasta or fastq) using kmer counts

Home https://github.com/TGAC/KAT
Versions 2.0.8, 2.3.1
License GPL3
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/kat

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install kat

and update with:

conda update kat

docker

A Docker container is available at https://quay.io/repository/biocontainers/kat.