recipe kiwidist

Combining gene-set analysis with network properties






package kiwidist

(downloads) docker_kiwidist



depends matplotlib:


depends mygene:


depends networkx:


depends numpy:


depends pandas:


depends python:


depends scipy:


depends six:




You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install kiwidist

and update with::

   mamba update kiwidist

To create a new environment, run:

mamba create --name myenvname kiwidist

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull<tag>

(see `kiwidist/tags`_ for valid values for ``<tag>``)

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