recipe kiwidist

Combining gene-set analysis with network properties

Homepage:

https://pypi.org/project/KiwiDist/

License:

MIT

Recipe:

/kiwidist/meta.yaml

package kiwidist

versions:

0.3.6-3,  0.3.6-2,  0.3.6-0,  0.3.5-0,  0.3.4-0

depends matplotlib:

>=1.3.1,<=1.4.3

depends mygene:

>=2.1.0

depends networkx:

>=1.8.1

depends numpy:

>=1.8.0

depends pandas:

>=0.13.1

depends python:

<3

depends scipy:

>=0.13.3,<=0.16.0

depends six:

>=1.5

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install kiwidist

and update with::

   mamba update kiwidist

To create a new environment, run:

mamba create --name myenvname kiwidist

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/kiwidist:<tag>

(see `kiwidist/tags`_ for valid values for ``<tag>``)

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