kmc

downloads

K-mer Counter is a utility designed for counting k-mers (sequences of consecutive k symbols) in a set of reads from genome sequencing projects.

Home http://sun.aei.polsl.pl/REFRESH/index.php?page=projects&project=kmc&subpage=about
Versions 2.3.0
License GPLv2
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/kmc

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install kmc

and update with:

conda update kmc

docker

A Docker container is available at https://quay.io/repository/biocontainers/kmc.