- recipe kmerinshort
KmerInShort counts kmers from a fasta/fastq file or list of files, and outputs results in a text file. It is limited to short kmers (k<15). It is a part of the FEELnc pipeline (V.Wucher et al.)
- Homepage
- License
aGPL v3
- Recipe
- package kmerinshort¶
-
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install kmerinshort
and update with:
conda update kmerinshort
or use the docker container:
docker pull quay.io/biocontainers/kmerinshort:<tag>
(see kmerinshort/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/kmerinshort/README.html)