kneaddata

downloads

KneadData is a tool designed to perform quality control on metagenomic and metatranscriptomic sequencing data, especially data from microbiome experiments.

Home http://huttenhower.sph.harvard.edu/kneaddata
Versions 0.5.2, 0.6.1
License MIT
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/kneaddata

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install kneaddata

and update with:

conda update kneaddata

docker

A Docker container is available at https://quay.io/repository/biocontainers/kneaddata.