kraken-ea

downloads

Kraken is a system for assigning taxonomic labels to short DNA sequences, usually obtained through metagenomic studies. This is a modified version allowing for splitting of fastq files based on read classifications.

Home https://github.com/ExpressionAnalysis/kraken/tree/v0.10.5-beta-ea.2
Versions 0.10.5ea.3
License GPLv3
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/kraken-ea

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install kraken-ea

and update with:

conda update kraken-ea

docker

A Docker container is available at https://quay.io/repository/biocontainers/kraken-ea.