- recipe kraken
Kraken is a system for assigning taxonomic labels to short DNA sequences, usually obtained through metagenomic studies.
- Homepage:
- License:
GPLv3
- Recipe:
- Links:
biotools: kraken, doi: 10.1186/gb-2014-15-3-r46
- package kraken¶
-
- Versions:
1.1.1-7
,1.1.1-6
,1.1.1-5
,1.1.1-4
,1.1.1-3
,1.1.1-2
,1.1.1-0
,1.1-2
,1.1-1
,1.1.1-7
,1.1.1-6
,1.1.1-5
,1.1.1-4
,1.1.1-3
,1.1.1-2
,1.1.1-0
,1.1-2
,1.1-1
,1.1-0
,1.0-0
,0.10.6_eaf8fb68-4
,0.10.6_eaf8fb68-3
,0.10.6_eaf8fb68-2
,0.10.6_eaf8fb68-1
,0.10.6_eaf8fb68-0
,0.10.5beta-2
,0.10.5beta-0
- Depends:
kmer-jellyfish
1.*
libgcc-ng
>=10.3.0
libstdcxx-ng
>=10.3.0
perl
>=5.32.1,<5.33.0a0 *_perl5
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install kraken
and update with:
conda update kraken
or use the docker container:
docker pull quay.io/biocontainers/kraken:<tag>
(see kraken/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/kraken/README.html)