kraken

Kraken is a system for assigning taxonomic labels to short DNA sequences, usually obtained through metagenomic studies.

Home	http://ccb.jhu.edu/software/kraken/
Versions	0.10.5beta, 0.10.6_eaf8fb68
License	GPLv3
Recipe	https://github.com/bioconda/bioconda-recipes/tree/master/recipes/kraken

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install kraken

and update with:

conda update kraken

A Docker container is available at https://quay.io/repository/biocontainers/kraken.

Link to this page

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