recipe krakenuniq

Metagenomics classifier with unique k-mer counting for more specific results

Homepage:

https://github.com/fbreitwieser/krakenuniq

License:

GPLv3

Recipe:

/krakenuniq/meta.yaml

Links:

biotools: krakenhll

package krakenuniq

Versions:

0.7.3-0,  0.7.2-0,  0.7.1-0,  0.7-0,  0.6-2,  0.6-1,  0.6-0,  0.5.8-4,  0.5.8-3, 

0.7.3-0,  0.7.2-0,  0.7.1-0,  0.7-0,  0.6-2,  0.6-1,  0.6-0,  0.5.8-4,  0.5.8-3,  0.5.8-2,  0.5.8-1,  0.5.8-0,  0.5.7-0,  0.5.6-0,  0.5.5-0,  0.5.3-0,  0.5.2-0

Depends:

• _openmp_mutex >=4.5

• bzip2 >=1.0.8,<2.0a0

• kmer-jellyfish 1.*

• libgcc-ng >=12

• libstdcxx-ng >=12

• libzlib >=1.2.12,<1.3.0a0

• perl >=5.32.1,<5.33.0a0 *_perl5

• perl-libwww-perl

• perl-lwp-protocol-https

• rsync

• tar

• wget

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install krakenuniq

and update with:

conda update krakenuniq

or use the docker container:

docker pull quay.io/biocontainers/krakenuniq:<tag>

(see krakenuniq/tags for valid values for <tag>)

Download stats

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