recipe linkstats

Collect and process statistics from aligned linked-reads.

Homepage:

https://github.com/wtsi-hpag/LinkStats

License:

MIT / MIT

Recipe:

/linkstats/meta.yaml

package linkstats

Versions:

0.1.3-2,  0.1.3-1,  0.1.3-0

Depends:

• click >=8.0.3

• htslib >=1.14,<1.15.0a0

• libgcc-ng >=10.3.0

• libstdcxx-ng >=10.3.0

• matplotlib-base >=3.5.1

• numpy >=1.22.0

• pandas >=1.3.5

• python >=3.8,<3.9.0a0

• python_abi 3.8.* *_cp38

• seaborn >=0.11.2

• tqdm >=4.62.3

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install linkstats

and update with:

conda update linkstats

or use the docker container:

docker pull quay.io/biocontainers/linkstats:<tag>

(see linkstats/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/linkstats/README.html)