recipe lofreq

A fast and sensitive variant-caller for inferring SNVs and indels from next-generation sequencing data

Homepage:

http://csb5.github.io/lofreq/

License:

MIT

Recipe:

/lofreq/meta.yaml

Links:

usegalaxy-eu: lofreq_call

package lofreq

(downloads) docker_lofreq

Versions:
2.1.5-62.1.5-52.1.5-42.1.5-32.1.5-22.1.5-12.1.5-02.1.4-32.1.4-2

2.1.5-62.1.5-52.1.5-42.1.5-32.1.5-22.1.5-12.1.5-02.1.4-32.1.4-22.1.3.1-02.1.2-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install lofreq

and update with:

conda update lofreq

or use the docker container:

docker pull quay.io/biocontainers/lofreq:<tag>

(see lofreq/tags for valid values for <tag>)

Download stats