recipe luciphor2

Luciphor2 performs PTM-site localization on MS/MS data

Homepage:

http://luciphor2.sourceforge.net/

License:

Apache-2.0

Recipe:

/luciphor2/meta.yaml

package luciphor2

Versions:

2020_04_03-1,  2020_04_03-0,  2018_06_28-1,  2018_06_28-0

Depends:

• openjdk >=6

Required By:

• openms-thirdparty

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install luciphor2

and update with:

conda update luciphor2

or use the docker container:

docker pull quay.io/biocontainers/luciphor2:<tag>

(see luciphor2/tags for valid values for <tag>)

Notes

Adds a wrapper shell script "luciphor2". This shell wrapper is called "luciphor2" and is on $PATH by default. By default "-Xms512m -Xmx1g" is set in the wrapper. If you want to overwrite it you can specify these values directly after your binaries. If you have _JAVA_OPTIONS set globally this will take precedence. For example run with "luciphor -Xms512m -Xmx1g"

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Link to this page

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