recipe macsyfinder

MacSyFinder: Detection of macromolecular systems in protein datasets using systems modelling and similarity search

Homepage:

https://github.com/gem-pasteur/macsyfinder

Documentation:

https://macsyfinder.readthedocs.io/en/latest

License:

GPL3 / GPL-3.0-or-later

Recipe:

/macsyfinder/meta.yaml

Links:

biotools: macsyfinder, doi: 10.1371/journal/pone.0110726

package macsyfinder

Versions:

2.1-0,  2.0-0

Depends:

• certifi

• colorama >=0.4.4

• colorlog

• hmmer >=3.1b2,<=3.3.2

• networkx >=2.4

• packaging >=18.0

• pandas >=1.1.5,<=1.4.3

• python

• pyyaml >=5.1.1

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install macsyfinder

and update with:

conda update macsyfinder

or use the docker container:

docker pull quay.io/biocontainers/macsyfinder:<tag>

(see macsyfinder/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/macsyfinder/README.html)