mageck-vispr

downloads

MAGeCK-VISPR is a comprehensive quality control, analysis and visualization workflow for CRISPR/Cas9 screens based on MAGeCK, VISPR, Snakemake, FastQC and cutadapt.

Home https://bitbucket.org/liulab/mageck-vispr
Versions 0.4.5, 0.4.6, 0.4.7, 0.5.2, 0.5.3
License MIT License
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/mageck-vispr

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install mageck-vispr

and update with:

conda update mageck-vispr

docker

A Docker container is available at https://quay.io/repository/biocontainers/mageck-vispr.