recipe magpurify

Identify and remove incorrectly binned contigs from metagenome-assembled genomes.

Homepage:

https://github.com/snayfach/MAGpurify

License:

GPL / GPL-3

Recipe:

/magpurify/meta.yaml

package magpurify

Versions:

2.1.2-1,  2.1.2-0,  2.1.1-0,  2.1.0-0,  2.0.1-0,  1.0-2,  1.0-1

Depends:

• biopython

• blast

• coverm

• hmmer

• last

• mash

• numpy

• pandas

• prodigal

• python >=3.6

• scikit-learn

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install magpurify

and update with:

conda update magpurify

or use the docker container:

docker pull quay.io/biocontainers/magpurify:<tag>

(see magpurify/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/magpurify/README.html)