manta

downloads

Structural variant and indel caller for mapped sequencing data

Home https://github.com/Illumina/manta
Versions 0.29.1, 0.29.3, 0.29.6, 1.0.0, 1.0.3, 1.1.0
License GPLv3
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/manta

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install manta

and update with:

conda update manta

docker

A Docker container is available at https://quay.io/repository/biocontainers/manta.