mapsplice

downloads

MapSplice is a software for mapping RNA-seq data to reference genome for splice junction discovery that depends only on reference genome, and not on any further annotations.

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Versions 2.2.0
License Custom
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/mapsplice

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install mapsplice

and update with:

conda update mapsplice

docker

A Docker container is available at https://quay.io/repository/biocontainers/mapsplice.