recipe mashtree

Create a tree using Mash distances

Homepage:

https://github.com/lskatz/mashtree

License:

GPL-3.0

Recipe:

/mashtree/meta.yaml

package mashtree

Versions:

1.2.0-1,  1.2.0-0,  1.1.2-0,  1.1-0,  1.0.4-0,  1.0.1-0,  1.0-0,  0.57-1,  0.57-0, 

1.2.0-1,  1.2.0-0,  1.1.2-0,  1.1-0,  1.0.4-0,  1.0.1-0,  1.0-0,  0.57-1,  0.57-0,  0.55-0,  0.37-0,  0.36-0,  0.35.4-0,  0.30-2,  0.30-0,  0.28-0,  0.26-0,  0.25-0,  0.21-0,  0.20-0,  0.12-0

Depends:

• libgcc-ng >=12

• mash >=1.1

• perl >=5.32.1,<5.33.0a0 *_perl5

• perl-bioperl >=1.7.2

• perl-dbd-sqlite >=1.58

• perl-file-which

• quicktree

• sqlite >=3.39.4,<4.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install mashtree

and update with:

conda update mashtree

or use the docker container:

docker pull quay.io/biocontainers/mashtree:<tag>

(see mashtree/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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