recipe megagta

HMM-guided metagenomic gene-targeted assembler using iterative de Bruijn graphs

Homepage:

https://github.com/HKU-BAL/megagta

License:

GNU General Public License v3 (GPLv3

Recipe:

/megagta/meta.yaml

package megagta

Versions:

0.1_alpha-0

Depends:

• hmmer >=3.1b2

• libgcc

• python >=2.7,<3

• zlib

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install megagta

and update with:

conda update megagta

or use the docker container:

docker pull quay.io/biocontainers/megagta:<tag>

(see megagta/tags for valid values for <tag>)

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Link to this page

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