recipe megagta

HMM-guided metagenomic gene-targeted assembler using iterative de Bruijn graphs

Homepage

https://github.com/HKU-BAL/megagta

License

GNU General Public License v3 (GPLv3

Recipe

/megagta/meta.yaml

package megagta

Versions

0.1_alpha-0

Depends

• hmmer >=3.1b2

• libgcc

• python >=2.7,<3

• zlib

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install megagta

and update with:

conda update megagta

or use the docker container:

docker pull quay.io/biocontainers/megagta:<tag>

(see megagta/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/megagta/README.html)