metacluster

downloads

MetaCluster5.1 is a new software for binning short pair-end reads

Home http://i.cs.hku.hk/~alse/MetaCluster/
Versions 5.1
License GPLv2
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/metacluster

MetaCluster5.1 is an unsupervised binning method that can (1) samples with low-abundance species, or (2) samples (even with high-abundance) with many extremely-low-abundance species. The input file should be in fasta format. Every odd-number read and its next read are supposed to be pair-end reads.

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install metacluster

and update with:

conda update metacluster

docker

A Docker container is available at https://quay.io/repository/biocontainers/metacluster.