recipe metacluster

MetaCluster5.1 is a new software for binning short pair-end reads

Homepage

http://i.cs.hku.hk/~alse/MetaCluster/

License

GPLv2

Recipe

/metacluster/meta.yaml

Links

doi: 10.1093/bioinformatics/bts397

MetaCluster5.1 is an unsupervised binning method that can (1) samples with low-abundance species, or (2) samples (even with high-abundance) with many extremely-low-abundance species. The input file should be in fasta format. Every odd-number read and its next read are supposed to be pair-end reads.

package metacluster

(downloads) docker_metacluster

Versions

5.1-15.1-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install metacluster

and update with:

conda update metacluster

or use the docker container:

docker pull quay.io/biocontainers/metacluster:<tag>

(see metacluster/tags for valid values for <tag>)