recipe metapop

A pipeline for the macro- and micro-diversity analyses and visualization of metagenomic-derived populations

Homepage

https://https://github.com/metaGmetapop/metapop

License

GPL / GPL-2.0

Recipe

/metapop/meta.yaml

package metapop

Versions

1.0.2-0

Depends

• bcftools 1.9.*

• bioconductor-biostrings

• bioconductor-rsamtools

• r-base

• r-bit64

• r-compositions

• r-cowplot

• r-data.table

• r-doparallel

• r-gggenes

• r-ggplot2

• r-pheatmap

• r-rcolorbrewer

• r-stringr

• r-vegan

• samtools 1.9.*

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install metapop

and update with:

conda update metapop

or use the docker container:

docker pull quay.io/biocontainers/metapop:<tag>

(see metapop/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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