recipe metapop

A pipeline for the macro- and micro-diversity analyses and visualization of metagenomic-derived populations

Homepage:

https://https://github.com/metaGmetapop/metapop

License:

GPL / GPL-2.0

Recipe:

/metapop/meta.yaml

package metapop

Versions:

1.0.2-1,  1.0.2-0

Depends:

• bcftools

• bioconductor-biostrings

• bioconductor-rsamtools

• r-base >=4.0,<4.1

• r-bit64

• r-compositions

• r-cowplot

• r-data.table

• r-doparallel

• r-gggenes

• r-ggplot2

• r-pheatmap

• r-rcolorbrewer

• r-stringr

• r-vegan

• samtools

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install metapop

and update with:

conda update metapop

or use the docker container:

docker pull quay.io/biocontainers/metapop:<tag>

(see metapop/tags for valid values for <tag>)

Download stats

Link to this page

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