recipe metaxa

Improved Identification and Taxonomic Classification of Small and Large Subunit rRNA in Metagenomic Data.

Homepage:

http://microbiology.se/software/metaxa2/

License:

GPL3

Recipe:

/metaxa/meta.yaml

Links:

biotools: metaxa, doi: 10.1111/1755-0998.12399, doi: 10.1093/bioinformatics/bty482

package metaxa

Versions:

2.2.3-1,  2.2.3-0,  2.2-3,  2.2-2,  2.2-1,  2.2-0

Depends:

• blast 2.2.*

• hmmer 3.1.*

• mafft 7.*

• perl >=5.32.1,<6.0a0 *_perl5

• vsearch >=2.7.0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install metaxa

and update with:

conda update metaxa

or use the docker container:

docker pull quay.io/biocontainers/metaxa:<tag>

(see metaxa/tags for valid values for <tag>)

Download stats

Link to this page

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