recipe mhcflurry

Peptide-MHC I binding affinity prediction

Homepage

https://github.com/hammerlab/mhcflurry

Documentation

http://openvax.github.io/mhcflurry/

License

Apache License Version 2.0

Recipe

/mhcflurry/meta.yaml

Links

doi: 10.1016/j.cels.2018.05.014

package mhcflurry

(downloads) docker_mhcflurry

Versions

1.2.4-0, 1.2.2-0

Depends appdirs

Depends keras

>=2.0.9

Depends mhcnames

Depends numpy

>=1.11

Depends pandas

>=0.20.3

Depends python

Depends pyyaml

Depends scikit-learn

Depends six

Depends tensorflow

>=1.1.0

Depends tqdm

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install mhcflurry

and update with:

conda update mhcflurry

or use the docker container:

docker pull quay.io/biocontainers/mhcflurry:<tag>

(see mhcflurry/tags for valid values for <tag>)