recipe micall-lite

A bioinformatic pipeline for mapping of FASTQ data to a set of reference sequences to generate consensus sequences, variant calls and coverage maps.

Homepage

https://github.com/PoonLab/MiCall-Lite

License

GNU Affero General Public License v3.0

Recipe

/micall-lite/meta.yaml

package micall-lite

(downloads) docker_micall-lite

Versions

0.1rc5-10.1rc5-00.1rc4-00.1rc3-00.1rc2-00.1rc-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install micall-lite

and update with:

conda update micall-lite

or use the docker container:

docker pull quay.io/biocontainers/micall-lite:<tag>

(see micall-lite/tags for valid values for <tag>)