recipe minys

MinYS allows targeted assembly of bacterial genomes using a reference-guided pipeline.

Homepage:

https://github.com/cguyomar/MinYS

License:

file

Recipe:

/minys/meta.yaml

package minys

Versions:

1.1-5,  1.1-4,  1.1-3,  1.1-2,  1.1-1,  1.1-0,  1.0-0

Depends:

• bwa

• libgcc-ng >=12

• libstdcxx-ng >=12

• mindthegap

• minia

• numpy

• pyani

• python >=3

• samtools

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install minys

and update with:

conda update minys

or use the docker container:

docker pull quay.io/biocontainers/minys:<tag>

(see minys/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/minys/README.html)