recipe mir-prefer

microRNA PREdiction From small RNA-seq data

Homepage

https://github.com/hangelwen/miR-PREFeR

License

GPL

Recipe

/mir-prefer/meta.yaml

microRNA PREdiction From small RNA-seq data

package mir-prefer

Versions

0.24-2, 0.24-1, 0.24-0

Depends

• bowtie >=1.2.0

• python >=2.7,<2.8.0a0

• samtools >=0.1.15

• viennarna >=1.8.5

Required By

• maker

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install mir-prefer

and update with:

conda update mir-prefer

or use the docker container:

docker pull quay.io/biocontainers/mir-prefer:<tag>

(see mir-prefer/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/mir-prefer/README.html)