mlst

downloads

Scan contig files against PubMLST typing schemes

Home https://github.com/tseemann/mlst
Versions 2.6, 2.9
License GPL2
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/mlst

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install mlst

and update with:

conda update mlst

docker

A Docker container is available at https://quay.io/repository/biocontainers/mlst.