recipe mlst

Scan contig files against PubMLST typing schemes

Homepage

https://github.com/tseemann/mlst

License

GPL / GPL-2.0

Recipe

/mlst/meta.yaml

Links

biotools: mlst

package mlst

(downloads) docker_mlst

Versions
2.19.0-02.18.1-02.18.0-02.17.6-12.17.6-02.16.4-02.16.2-12.16.2-02.16.1-0

2.19.0-02.18.1-02.18.0-02.17.6-12.17.6-02.16.4-02.16.2-12.16.2-02.16.1-02.16-02.15.2-02.15.1-02.15-02.14-02.13-02.12-02.11-02.10-12.10-02.9-22.9-12.9-02.6-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install mlst

and update with:

conda update mlst

or use the docker container:

docker pull quay.io/biocontainers/mlst:<tag>

(see mlst/tags for valid values for <tag>)