recipe mmdb2

C++ toolkit for working with macromolecular coordinate files.

Homepage:

https://www.ccp4.ac.uk

License:

GPL3 / GPL-3.0-or-later AND LGPL-3.0-or-later

Recipe:

/mmdb2/meta.yaml

Links:

doi: 10.1107/S0907444904027167

MMDB2 is a C++ toolkit for working with macromolecular coordinate files. It provides functionality for reading, writing, and manipulating PDB and mmCIF files, including support for crystallographic symmetry operations and molecular geometry calculations.

package mmdb2

(downloads) docker_mmdb2

versions:

2.0.22-2,  2.0.22-1,  2.0.22-0

depends libgcc:

>=13

depends libstdcxx:

>=13

depends libzlib:

>=1.3.1,<2.0a0

depends pkg-config:

requirements:

additional platforms:
linux-aarch64,  osx-arm64

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install mmdb2

and update with::

   mamba update mmdb2

To create a new environment, run:

mamba create --name myenvname mmdb2

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/mmdb2:<tag>

(see `mmdb2/tags`_ for valid values for ``<tag>``)

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Link to this page

Render an install-with-bioconda badge with the following MarkDown:

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