recipe moff

moFF is an OS independent tool designed to extract apex MS1 intensity using a set of identified MS2 peptides.

Homepage

https://github.com/compomics/moFF

License

Apache 2.0

Recipe

/moff/meta.yaml

Links

doi: 10.1021/acs.jproteome.8b00708, usegalaxy-eu: proteomics_moff

package moff

Versions

2.0.3-5,  2.0.3-4,  2.0.3-3,  2.0.3-2,  2.0.2-2,  2.0.2-1,  2.0.2-0,  2.0.1-0,  1.2.1-1, 

2.0.3-5,  2.0.3-4,  2.0.3-3,  2.0.3-2,  2.0.2-2,  2.0.2-1,  2.0.2-0,  2.0.1-0,  1.2.1-1,  1.2.1-0,  1.2-0,  1.1-0

Depends

• brain-isotopic-distribution

• mono

• numpy >=1.15

• pandas >=0.23,<1.0.0

• pymzml >=2.0.6

• pynumpress

• pyteomics >=3.5

• python >=3.4,<3.7

• scikit-learn >0.19

• scipy >=1.1

• simplejson >=3.16.1

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install moff

and update with:

conda update moff

or use the docker container:

docker pull quay.io/biocontainers/moff:<tag>

(see moff/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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