recipe mpboot

Fast phylogenetic maximum parsimony tree inference and bootstrap approximation.

Homepage:

https://github.com/diepthihoang/mpboot

Documentation:

http://www.cibiv.at/software/mpboot

License:

GPL2 / GPL-2.0-only

Recipe:

/mpboot/meta.yaml

Links:

doi: 10.1186/s12862-018-1131-3

package mpboot

(downloads) docker_mpboot

versions:

1.2-0

depends _openmp_mutex:

>=4.5

depends libgcc:

>=13

depends libgomp:

depends libstdcxx:

>=13

depends libzlib:

>=1.3.1,<2.0a0

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install mpboot

and update with::

   mamba update mpboot

To create a new environment, run:

mamba create --name myenvname mpboot

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/mpboot:<tag>

(see `mpboot/tags`_ for valid values for ``<tag>``)

Download stats