- recipe nanosim
NanoSim is a fast and scalable read simulator for Nanopore sequencing data.
- Homepage:
- License:
GPL-3.0
- Recipe:
- Links:
doi: 10.1093/gigascience/gix010, doi: 10.1093/gigascience/giaa061
- package nanosim¶
-
- Versions:
3.1.0-0
,3.0.2-0
,3.0.0-0
,2.6.0-1
,2.6.0-0
,2.5.1-1
,2.5.1-0
,2.5.0-0
,2.2.0-0
,3.1.0-0
,3.0.2-0
,3.0.0-0
,2.6.0-1
,2.6.0-0
,2.5.1-1
,2.5.1-0
,2.5.0-0
,2.2.0-0
,2.1.0-0
,2.0.0-1
,2.0.0-0
,v1.3.0-0
,v1.2.0-0
,v1.0.1-1
- Depends:
htseq
>=0.9.1
numpy
>=1.13.3
pybedtools
>=0.7.10
pysam
>=0.13
scikit-learn
>=0.20.0
scipy
>=1.0.0
six
>=1.10.0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install nanosim
and update with:
conda update nanosim
or use the docker container:
docker pull quay.io/biocontainers/nanosim:<tag>
(see nanosim/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/nanosim/README.html)