- recipe ncbi-amrfinderplus
AMRFinderPlus finds antimicrobial resistance and other genes in protein or nucleotide sequences.
- Homepage:
- License:
Public Domain
- Recipe:
This software and the accompanying database are designed to find acquired antimicrobial resistance genes in bacterial protein or nucleotide sequences as well as known point mutations for several taxa. With AMRFinderPlus we have added select members of additional classes of genes such as virulence factors, biocide, heat, acid, and metal resistance genes.
- package ncbi-amrfinderplus¶
-
- Versions:
3.11.2-0
,3.10.45-0
,3.10.42-0
,3.10.40-1
,3.10.40-0
,3.10.36-1
,3.10.36-0
,3.10.30-1
,3.10.30-0
,3.11.2-0
,3.10.45-0
,3.10.42-0
,3.10.40-1
,3.10.40-0
,3.10.36-1
,3.10.36-0
,3.10.30-1
,3.10.30-0
,3.10.24-0
,3.10.23-1
,3.10.23-0
,3.10.21-0
,3.10.20-0
,3.10.18-0
,3.10.16-0
,3.10.14-0
,3.10.5-0
,3.10.1-1
,3.10.1-0
,3.9.8-0
,3.9.3-0
,3.8.28-0
,3.8.4-1
,3.8.4-0
,3.6.15-0
,3.6.10-0
,3.6.7-0
,3.6.4-0
,3.2.3-0
,3.2.1-0
,3.1.1b-0
,3.0.12-0
,3.0.11-0
,3.0.9-0
,3.0.8-0
- Depends:
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install ncbi-amrfinderplus
and update with:
conda update ncbi-amrfinderplus
or use the docker container:
docker pull quay.io/biocontainers/ncbi-amrfinderplus:<tag>
(see ncbi-amrfinderplus/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/ncbi-amrfinderplus/README.html)