recipe ngmlr

ngmlr is a long-read mapper designed to align PacBio or Oxford Nanopore reads to a reference genome and optimized for structural variation detection

Homepage

https://github.com/philres/ngmlr

License

MIT

Recipe

/ngmlr/meta.yaml

package ngmlr

(downloads) docker_ngmlr

Versions
0.2.7-20.2.7-10.2.7-00.2.6-10.2.6-00.2.5-00.2.4-20.2.4-10.2.4-0

0.2.7-20.2.7-10.2.7-00.2.6-10.2.6-00.2.5-00.2.4-20.2.4-10.2.4-00.2.3-20.2.3-10.2.3-00.2.2-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install ngmlr

and update with:

conda update ngmlr

or use the docker container:

docker pull quay.io/biocontainers/ngmlr:<tag>

(see ngmlr/tags for valid values for <tag>)