recipe ngs-smap

SMAP is an analysis tool for stack-based NGS read mapping

Homepage:

https://gitlab.com/truttink/smap

License:

CC / CC BY-NC-SA 4.0

Recipe:

/ngs-smap/meta.yaml

package ngs-smap

Versions:

4.6.5-0,  4.6.4-0,  4.6.2-0,  4.6.1-0,  4.6.0-0,  4.5.1-0,  4.5.0-0

Depends:

• colorlog >=6.6.0,<6.7

• matplotlib-base >=3.5.1,<3.6

• pandas >=1.4.0,<1.5

• pybedtools >=0.9.0,<0.10

• pysam >=0.18.0,<0.19

• python >=3.8.1

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install ngs-smap

and update with:

conda update ngs-smap

or use the docker container:

docker pull quay.io/biocontainers/ngs-smap:<tag>

(see ngs-smap/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/ngs-smap/README.html)