Powerful tool designed for mapping of short reads onto a reference genome from Illumina, Ion Torrent, and 454 NGS platforms
|Versions||3.03.02, 3.04.04, 3.06.05, 3.07.00|
|License||Commercial (requires license for multithreaded use)|
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install novoalign
and update with:
conda update novoalign
Novoalign runs in single-threaded mode by default unless a “novoalign.lic” license file is provided in the same directory as its binaries. The license file can be copied in to the conda environment via the “novoalign-license-register” command.
A Docker container is available at https://quay.io/repository/biocontainers/novoalign.