recipe ntm-profiler

Profiling tool for NTM to detect species and resistance from WGS data

Homepage:

https://github.com/jodyphelan/NTM-Profiler

License:

GPL3

Recipe:

/ntm-profiler/meta.yaml

package ntm-profiler

Versions:

0.2.2-0,  0.2.1-0,  0.2.0-0,  0.1.1-0,  0.1.0-0,  0.0.2-0,  0.0.1-0

Depends:

• jinja2

• mash 2.3.*

• pathogen-profiler 2.0.4.*

• python >=3.7

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install ntm-profiler

and update with:

conda update ntm-profiler

or use the docker container:

docker pull quay.io/biocontainers/ntm-profiler:<tag>

(see ntm-profiler/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/ntm-profiler/README.html)