recipe octopus

Octopus is a mapping-based variant caller that implements several calling models within a unified haplotype-aware framework.

Homepage:

https://github.com/luntergroup/octopus

License:

MIT / MIT

Recipe:

/octopus/meta.yaml

package octopus

(downloads) docker_octopus

Versions:
0.7.4-20.7.4-10.7.4-00.6.3b-30.6.3b-20.6.3b-10.6.3b-00.5.2b-20.5.2b-1

0.7.4-20.7.4-10.7.4-00.6.3b-30.6.3b-20.6.3b-10.6.3b-00.5.2b-20.5.2b-10.5.2b-00.5.1b-00.5.0b-00.4.1a-10.4.1a-00.3.3a-10.3.3a-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install octopus

and update with:

conda update octopus

or use the docker container:

docker pull quay.io/biocontainers/octopus:<tag>

(see octopus/tags for valid values for <tag>)

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