optitype

downloads

Precision HLA typing from next-generation sequencing data

Home https://github.com/FRED-2/OptiType
Versions 1.2, 1.2.1
License BSD
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/optitype

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install optitype

and update with:

conda update optitype

docker

A Docker container is available at https://quay.io/repository/biocontainers/optitype.