recipe paragraph

Graph realignment tools for structural variants

Homepage

https://github.com/Illumina/paragraph

License

Apache License 2.0

Recipe

/paragraph/meta.yaml

package paragraph

Versions

2.3-1,  2.3-0,  2.2b-0,  2.2a-0

Depends

• bzip2 >=1.0.8,<2.0a0

• htslib >=1.10.2,<1.11.0a0

• intervaltree

• jsonschema

• libgcc-ng >=7.5.0

• libstdcxx-ng >=7.5.0

• pysam

• python >=3

• zlib >=1.2.11,<1.3.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install paragraph

and update with:

conda update paragraph

or use the docker container:

docker pull quay.io/biocontainers/paragraph:<tag>

(see paragraph/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/paragraph/README.html)